protein via AutoDock Vina. From the 2471 drugs, 128 FDA-approved drugs were
found to be suitable, with 18 drugs reported with antiviral effects. Virtual screening
was performed on the 18 drugs with ACE-2, 3CLpro, PLpro, HR1, and TMPRSS2
via PyRx 0.8 software. Of the 18 drugs, 7 drugs were most favourable and deemed as
promising DR candidates, namely, glecaprevir, simeprevir, ledipasvir, paritaprevir,
glycyrrhizic acid, Hesperidin, and TMC-310911.
Using the LigPlot program, glycyrrhizic acid and hesperidin showed the highest
number of H-bond interaction with ACE2 and RBD amongst all candidates.
Glycyrrhizic acid, an active ingredient obtained from the roots of the licorice
plant, has been proven to show positive effects in numerous viral diseases, such as
herpes simplex type 1 (HSV-1), varicella zoster virus (VZV), HIV, SARS, and
Epstein-Barr virus (EBV). On the other hand, hesperidin is a flavonoid extracted
from citrus fruit, which has been demonstrated to inhibit replication in influenza A
virus (IAV). Apart from that, hesperidin exhibits potent 3CLpro inhibition, an
effective target for SARS-CoV-2. Conclusively, the importance in computational
approach for DR is once again affirmed, especially in an urgent pandemic such as the
current ongoing COVID-19.
5.4
Challenges of DR
5.4.1
Optimization of Repositioned Drugs, Intellectual Property,
and Compound Availability
Although DR offers great benefits and opportunities over the de novo drug discov-
ery, there are also some drawbacks, gaps, and challenges that come along the way.
According to Pritchard et al. (2017), if the repositioned drug is intended for a new
population, or if the dosage and delivery method of the drug needs to be optimized,
clinical trials including animal models, followed by a clinical program, are still
required to test its safety. Normally, phase III of a clinical trial is a very lengthy
process, presenting itself as one of the obstacles in the development of repositioned
drugs. In unprecedented cases, the duration may be reduced when the number of
incidences is relatively low during the AD recruitment process of a clinical trial. For
example, the clinical trial conducted for COVID-19 in China using the repositioned
drug, remdesivir, was halted due to an inadequate number of infected patients to
achieve the requirement of a trial recruitment target (Wang and Xu 2020).
Concerns regarding intellectual property (IP) also arise as repositioned drugs
need to endure a strenuous process to be patented, because it has been publicly
unveiled. However, the eligibility for obtaining IP protection varies between
jurisdictions across the globe (Lexology 2021). Consequently, it may discourage
pharmaceutical companies from the opportunity to generate more revenue and
retrieve as much profitable development costs of the repositioned drug to resemble
that of a de novo drug discovery (Rastegar-Mojarad et al. 2015; Nosengo 2016).
Companies may experience financial distress, eventually resulting in interference of
the drug development process. Therefore, it is crucial to seek clarity on up-to-date
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